amino acid metabolism summary

The pancreas of all mammals contains a potent tryptic, The oligopeptides formed by the action of the endopeptidases are broken down into their constituent amino acids by the action of the exopeptidases. Positive nitrogen balance, an excess of ingested over excreted nitrogen, accompanies growth and pregnancy. This chapter will describe our knowledge of the biosynthesis and utilization in Chlamydomonas of the 21 genetically encoded amino acids (the standard 20 amino acids plus selenocysteine), and touch on some of their downstream metabolites. Although the equilibrium of this reaction is very much in favour of glutamate formation, in the cell the rapid removal of the 2-oxoglutarate and NAD(P)H allows the enzyme to function efficiently in the direction of glutamate deamination. Regulation of amino acid metabolism by epinephrine Am J Physiol. Amino acids are not only components of proteins but also intermediate metabolites fueling multiple biosynthetic pathways. In normal adults, nitrogen intake matches nitrogen excreted. The amino acids are joined by peptide bonds making a polypeptide chain. INTRODUCTION Amino acids are the basic building blocks of proteins. Hepatocytes located next to the cava vein system (venous hepatocytes) are rich in glutamine synthetase. Both act as carriers of amines from other tissues. William J. Marshall, in Clinical Biochemistry: Metabolic and Clinical Aspects (Third Edition), 2014. The amino acids which produce pyruvate, 2-oxoglutarate, succinyl-CoA, oxaloacetate or fumarate are said to be glucogenic. 10 of the 20 amino acids are essential, meaning that you obtain them from dietary sources rich in protein, such as meats or tofu. The small intestines, liver, kidneys, and muscle are organs that play an essential role in amino acid metabolism. Liver glutamate dehydrogenase is a very active enzyme, and the reaction is not rate-limiting for amino acid deamination. Amino acid–depletion therapies target amino acid uptake and catabolism using heterologous enzymes or recombinant or engineered human enzymes. To describe how excess amino acids are degraded. The carboxypeptidase of the pancreas splits amino acids one by one from the, The transport of most amino acids in the intestine is linked to the transport of Na, Thus the energy for the active transport of amino acids is derived indirectly from the hydrolysis of ATP (. LOS ANGELES, United States: QY Research has recently published a report, titled “Global Amino Acid Metabolism Disorder Drug Market Report, History and Forecast 2015-2026, Breakdown Data by Companies, Key Regions, Types and Application“.The research report gives the potential headway openings that prevails in the global market. Glucose uptake also plays a role, a finding indicating that a positive energy balance, as well as the provision of amino acids, allows insulin to promote nitrogen accretion most effectively.15,199,200 Studies indicate that insulin can enhance the mitogen-activated protein kinase (mitogen-activated pathway) in fetal skeletal muscle,204 and both insulin and IGF-I regulate protein synthesis through well-recognized intermediates in their signal transduction pathways, including mammalian target of rapamycin and the eukaryotic initiation factors.205. An et al. Liver cells located around the portal system vessels (portal hepatocytes) receive blood directly from the intestine and are rich in glutaminase, glutamate dehydrogenase, and all the enzymes of the urea cycle. Roberts, in Liver Pathophysiology, 2017. Not all amino acids are deaminated in this way. The role of insulin and glucose in fetal hind limb skeletal muscle metabolism of amino acids was studied in the fetal sheep by several groups.198–203 Under hyperinsulinemic conditions in which glucose and amino acids were also infused to maintain their concentrations relatively in the normal range, there was an increased net uptake of most amino acids by the hind limb, reflecting reduced rates of proteolysis more than increased rates of protein synthesis. Amino acid metabolism is reprogrammed due to its important role in energy metabolism abnormity in tumor cells. When the dietary protein content is low, these enzymes are suppressed, while the expression of these enzymes is stimulated when dietary protein is more than adequate. YhaO is a HAAAP family amino acid transporter ofD- andL-serine (13), which activates expression of the LEE through YhaJ, a LysR- type transcription factor that directly binds the LEE regulatory region to drive its expression. Summary. The organ which retains its protein most avidly is the brain. During fasting periods, the intestine oxidizes glutamine that is released into the circulation by muscle. The carbon skeleton of the amino acids is first converted to keto acids (by transamination) … Metabolic syndrome (MetS) is a health disorder characterized by metabolic abnormalities that predict an increased risk to develop cardiovascular disease (CVD) and type 2 diabetes. In general, the deaminated residues of the various amino acids are converted into intermediates of the citrate cycle, acetyl-CoA or acetoacetyl-CoA. 8 videos Play all Protein / Amino Acid Metabolism Moof University Purine and Pyrimidine Nucleotide Biosynthesis - Duration: 12:30. During the degradation of amino acids in peripheral tissues such as skeletal muscle, the ammonia formed is not released directly into the bloodstream. Amino acids are organic compounds that consist of a carbon atom attached to a carboxyl group, a hydrogen atom, an amino group, and a variable R group (side chain). By continuing you agree to the use of cookies. The protein of some tissues appears to be more labile than in others. Leucine is … The amino groups of glutamine and asparagine are directly hydrolysed by the enzymes glutaminase and asparaginase with the production of ammonia. Summary The aim of this study was to find some relationship between amino acid metabolism and the embryo morphokinetic parameters studied via time-lapse analysis. All transaminases require pyridoxal phosphate, a derivative of vitamin B, The glutamate formed by the transamination of amino acids with 2-oxoglutarate then undergoes oxidative deamination via the, Glutamate dehydrogenase is a mitochondrial enzyme which can use either NAD, Glutamate dehydrogenase is responsible not only for the deamination of glutamate itself but also indirectly for the deamination of many other amino acids. In addition, in the fetal sheep there is a net uptake of serine and glutamate by the hind limb; these are not supplied by placental transfer to the fetal circulation and thus represent a requirement for net hepatic synthesis of these amino acids for disposal in the fetal tissues. Amino acid metabolism in skeletal muscle has been studied in vivo in fetal sheep by measuring blood flow to the hind limb and by sampling for amino acid concentration differences between femoral arterial and venous blood. Here, the NH3 is mainly transferred to glutamate to form glutamine. The ammonia produced by glutamine metabolism in the gut returns immediately via the portal circulation to the liver, where it is detoxified. Muscle. Particular individuals were found to have well-defined requirements although there was considerable variation from one person to another. The hydroxyamino acids serine and threonine are acted upon by the enzymes serine dehydratase and threonine dehydratase respectively, again with the direct production of ammonia, while proline, arginine and histidine are metabolized to form glutamate and the amino group is then removed by glutamate dehydrogenase. Metabolic breakdown of individual amino acids Catabolism of amino acids gives rise to the intermediate compounds of citric acid cycle. (2016) incorporated 3CDIT, a better substrate of LAT1 which is highly expressed both in BBB and glioma tumor cells, into pOEI/DOX/ATP aptamer NP for elevated accumulation and rapid GSH & ATP dual-responsive DOX release in glioma. The metabolism of neutral amino acids eventually results in the formation of urea and carbon dioxide, for example: It is instructive, however, to look at this process in more detail. Charged amino acids: Highest value . Glutamine, proline, arginine and histidine are converted to α-ketoglutarate through glutamate. There is a large variety of proteases, classified into one of six groups (as of 2008): serine proteases, metalloproteases, aspartic acid proteases, cysteine proteases, threonine proteases, and glutamic acid proteases. Day, in, Molecular Medical Microbiology (Second Edition), Amino Acid and Protein Turnover and Metabolism in Acute Renal Failure, Critical Care Nephrology (Second Edition), Nutritional Support in the Critically Ill with Acute Renal Failure, Hydrogen ion homoeostasis and tissue oxygenation and their disorders, Clinical Biochemistry: Metabolic and Clinical Aspects (Third Edition), Hepatic Metabolism in Liver Health and Disease, Fetal Requirements and Placental Transfer of Nitrogenous Compounds, Fetal and Neonatal Physiology (Third Edition). Amino acid metabolism is highly limited in Orientia. The products formed, together with the remaining amino acids in the diet, are sent to the liver via the portal vein. Summary. Each amino acid has nitrogen-containing amine group, and a carboxylic acid - hence the name amino acid! (2016) applied docetaxel-loaded glutamate-d-tocopherol polyethylene glycol 1000 succinate copolymer (Glu-TPGS)-functionalized LAT1targeting liposomes (DTX-TGL) to achieve the reformative BBB penetration and glioma targeted accumulation. The carbon skeletons can be oxidized to CO2 and H2O or used for gluconeogenesis and ketogenesis. Omitting the transamination step, the intermediate stages are: Thus, although urea synthesis generates hydrogen ions, these are utilized during the metabolism of the carbon skeleton so that the metabolism of neutral amino acids does not result in net generation of hydrogen ions provided that the nitrogen is converted into urea. In patients with liver disease, the regulation of protein metabolism is often disturbed and varied, and change with disease etiology and severity. In short, the hallmark of metabolic alterations in ARF is activation of protein catabolism with excessive release of amino acids from skeletal muscle and sustained negative nitrogen balance.12 In critically ill patients on continuous renal replacement therapy (CRRT), protein catabolic rate accounts, on average, for 1.4 to 1.7 g/kg BW/day. Exercise results in marked alterations in amino acid metabolism within the body. The net result of the two reactions is the deamination of one molecule of the amino acid with the production of one molecule of its corresponding α-oxo acid and one molecule of ammonia and the reduction of one molecule of NAD(P)+. However, the plant pathways themselves are largely inferred from microbial (bacterial, fungal) pathways and may be improperly described. This organ captures glutamine released from muscles. Tissue interrelationships in amino acid metabolism, Click to share on Twitter (Opens in new window), Click to share on Facebook (Opens in new window), Click to share on Google+ (Opens in new window), on The metabolism of proteins and amino acids, Normal adults of any mammalian species are in a state of, During growth, pregnancy and recovery from injury or wasting disease, the nitrogen intake is likely to exceed the nitrogen output since new tissue is being formed. CO∼SCoA+AMP+PPi. William W. Answers ; Sources; Learning Objectives. Summary. How is this pool formed? All transaminases require pyridoxal phosphate, a derivative of vitamin B6 (page 165), as a cofactor which transfers the α-amino group from an amino acid to a keto acid. Average results for men, women and infants are given in, A summary of amino acid metabolism is given in, The breakdown of amino acids involves the liberation of the α-amino group in the form of ammonia. F. Amino acid nitrogen forms ammonia, which is toxic. Results showed that more efficient therapeutic effects came with 3CDITtargeting pOEI/DOX/ATP aptamer NP than free DOX and no systemic toxicity was observed. From: Encyclopedia of Biological Chemistry (Second Edition), 2013, R.Y. This amino acid is largely concentrated in the muscle tissue and contributes to muscle metabolism. Thus, amino acid transporters which overexpressed in tumor cells have become drug targets for cancer therapy. They are conceptually identical to disorders caused by enzyme defects that result in the accumulation of the organic acid intermediates. The liver is very efficient in the removal of ammonia. In summary, the effect of epinephrine on plasma/intracellular total, gluconeogenic, and BCAA concentrations is similar to insulin. At the same time, other amino acids related to tumor growth are all exceedingly indispensable to sustain tumor cells along with the rapid and unlimited proliferation (Wise and Thompson, 2010). Amino acids from protein digestion are absorbed in the small intestine. The most controversial question relating to nutritional support in critically ill patients with ARF is the optimal intake of amino acids and protein. Moof University 207,226 views Succinyl CoA is a point of entry for non polar amino acids like methionine, valine and isoleucine. Amino acids are metabolised in two steps: Moving the amino group from the amino acid to glutamate. This amino acid is needed for hemoglobin production, energy regulation, and immune function. The report is amalgamated depending on research … can synthesize the whole range of amino acids that it requires to build proteins. On long-term basis, amino acids metabolism is regulated by the hormones glucagon and cortisol, as well as by amino acids supply. Kidney. In humans, non-essential amino acids are synthesized from intermediates in major metabolic pathways such as the Citric Acid Cycle. The branched-chain amino acids, especially leucine, are particularly important since they contribute as energy substrates and as nitrogen donors in the formation of alanine, glutamine and aspartate. Humans require at least eight and probably ten. G. The liver is the major site of amino acid metabolism in the body and the major site of urea synthesis. Fetal hind limb tissues in the sheep do not release alanine or glutamine under normal conditions, in spite of their large net hepatic uptake rates. Thus a particular organ or tissue may grow or be repaired even though the body is in overall, Protein molecules are too large to be transported through the gut wall to the bloodstream by the normal absorptive processes and, even if this were possible, it would be dangerous because foreign proteins cause toxic reactions in the body. Summary. The amine group is separated and incorporated into urea. However, the acute uremic state exerts fundamental and specific alterations of metabolism, and metabolic and nutritional balances are affected also by renal replacement therapy. Proteins are the most important and the most abundant biomolecules in the human body – a total protein amount corresponds to 14 kg (true for man weighing 70 kg). 1990 May;258(5 Pt 1):E878-87. Intestine preferably uses glutamine and asparagine as energy suppliers. Those amino acids that are not used for building new proteins may be broken down further to enter the metabolic processes discussed in this chapter. Most amino acids are metabolised in the liver, but some are almost exclusively metabolised in muscle. Ultimately, they will be completely metabolized. Protein synthesis was more strongly regulated by the plasma concentration of amino acids than by insulin alone. Though paradoxical, mammalian hosts have learned to take advantage of amino acid catabolism for controlling pathogen invasion and, at the same time, regulating their own immune responses. Overall, the amino acid composition of dietary protein and the manner of amino acid metabolism is such that, in health, there is a small net production of hydrogen ions. Amino acid and protein metabolism in ARF are detailed in Chapter 136. Transamination reactions are catalysed by a group of enzymes called, Transaminase reactions are freely reversible so that they function in both the synthesis and breakdown of amino acids. Intestine. In many instances, therefore, information is essentially limited to a description of the gene repertoire based on analysis of the genome sequence (except where noted, version 3.0 has been used). Amino acids also serve as precursors of many important metabolites: pyrimidines, glutathione, heme, nucleotides, polyamines, etc. Reactions catalyzed by glutaminase and glutamate dehydrogenase produce ammonia, which is converted to ammonium ion and excreted in urine, neutralizing anions. Daniel H. Paris, ... Nicholas P.J. Wilfred Druml, in Critical Care Nephrology (Second Edition), 2009, Amino acid and protein metabolism in patients with acute renal failure (ARF) is affected by a broad pattern of various factors: the presence of an acute disease state (systemic inflammatory response syndrome, acute phase reaction), that is, the underlying disease process leading to ARF; and associated complications, especially infections and sepsis (Table 136-1). The pathways involved are long and complex and will not be considered in detail. Initially the energy is obtained mainly at the expense of body fat, although some tissue breakdown also occurs. The amino groups of glutamine and asparagine are directly hydrolysed by the enzymes, In general, the deaminated residues of the various amino acids are converted into intermediates of the citrate cycle, acetyl-CoA or acetoacetyl-CoA. This chapter describes how the nitrogen of amino acids is converted to urea and the rare metabolic disorders that accompany defects in urea biosynthesis. The carbon skeletons of amino acids are in general glucogenic, although some are ketogenic. The pathways involved are long and complex and will not be considered in detail. However, not all hepatocytes are equally involved in this function. Amino acid metabolism both produces and consumes hydrogen ions, according to the type of amino acid concerned. Glutamate dehydrogenase is responsible not only for the deamination of glutamate itself but also indirectly for the deamination of many other amino acids. So that's why I think that amino acid metabolism doesn't usually get its fair share of airtime, compared to processes like glycolysis and fatty acid oxidation. Cederbaum, in Reference Module in Biomedical Sciences, 2014. In patients with cirrhosis, there is increased endogenous leucine flux, an indicator of protein breakdown and decreased protein synthesis in response to a meal. The pool is dynamic, and is constantly being used as a source of substrate for various reactions, and is constantly being replenished. In general, transaminases have a high Km value for the appropriate amino acid but a much lower Km for 2-oxoglutarate. Antonio Blanco, Gustavo Blanco, in Medical Biochemistry, 2017. In this way, ancient catabolic enzymes have acquired novel functions and evolved into new structures with highly specialized functions, which go beyond the struggle for survival. If it is not, the effect on hydrogen ion metabolism may be different. Most amino acids are metabolized by transamination in the liver to yield the corresponding oxoacid, the amino group being transferred to 2–oxoglutarate to form glutamate. What's more, Li et al. The degradation of branched chain amino acids mainly starts in skeletal muscle. The inborn errors of amino acid metabolism are a family of genetic conditions in which an enzyme deficiency results in the accumulation of a ninhydrin-positive amino acid or a proximal metabolite. 20.10: Energy Metabolism (Summary) Last updated; Save as PDF Page ID 161798; No headers. To ensure that you understand the material in this chapter, you should review the meanings of the bold terms in the following summary and ask yourself how they relate to the topics in the chapter. Moreover, hepatic protein synthesis and secretion of acute-phase proteins are stimulated. Summary; Concept Review Exercises; Answers; Exercises. In conclusion, an amino acid/protein intake of 1.2 to a maximum of 1.7 g/kg BW/day is recommended.13 These calculations include amino acid/protein losses induced by RRT. In this review, we focus on multiple amino acids and their transporters, solute carrier (SLC) members. The glutamate is then deaminated via the glutamate dehydrogenase reaction and 2-oxoglutarate is regenerated and is available to transaminate with another molecule of amino acid. Amino acid metabolism in different cells and their cross-talk shape tumor immunity and therapy efficacy in patients with cancer. Amino acid metabolism Amino acid metabolism both produces and consumes hydrogen ions, according to the type of amino acid concerned. The endopeptidases and carboxypeptidases, which like trypsin and chymotrypsin are produced in the pancreas, are secreted in precursor or, Protein digestion starts in the stomach where the acid secreted by the oxyntic cells both assists the denaturation of the proteins and activates the, On passing into the duodenum the chyme from the stomach is mixed with the pancreatic juice which contains, Trypsin is unique among pancreatic enzymes in that it is capable of activating all the pancreatic proenzymes including itself. The mixtures contained all the amino acids except the one under investigation which was given separately and, by slight alterations in the level of intake, the subject could be made to go reproducibly from positive to negative balance and back again. For example, when alanine is transaminated with 2-oxoglutarate, pyruvate and glutamate are produced. Approximately the same amount of amino acids is incorporated into proteins at process called proteosy… The amino group of the amino acids is utilized for the formation of urea which is an excretory end product of protein metabolism. Amino acid metabolism. These tissue interrelationships in amino acid degradation are illustrated in, Schematic diagram of interrelationships between liver, intestine and peripheral tissues in nitrogen metabolism in mammals, The initial step in the degradation of many amino acids is a transamination reaction whereby the α-amino group of the amino acid is transferred to α-oxoglutarate with the formation of glutamate and the α-oxo acid corresponding to the amino acid in question. The losses, which are losses of functional protein, are greatest and occur most rapidly from the liver, the pancreas and the intestinal mucosa all of which normally synthesize large amounts of protein. An outline of the metabolic fate of the various amino acids is given in Figure 19.4. Splitting the amino group from the carbon skeleton is done by aminotransferases, sometimes called transaminases. Shanshan Wang, ... Rongqin Huang, in Brain Targeted Drug Delivery System, 2019. The relevance of this is discussed in a later section of this chapter. An essential amino acid is one that an animal is either unable to synthesize for itself or which it cannot synthesize at a sufficient rate to meet the needs for metabolism and growth. Biomarkers can provide an insight into the novel mechanism for MetS and can be potentially used for personalized response to therapies. Day, in Molecular Medical Microbiology (Second Edition), 2015. Unlike in biochemistry classes, knowing specifics about each amino acid is not necessary for Step 1. provides the −NH−group. However, they are critical for biosynthesis of nucleotides, antioxidant Amino acids also serve as precursors of many important metabolites: pyrimidines, glutathione, heme, nucleotides, polyamines, etc. the nucleic acids as well as numerous small molecular compounds. Glucagon activates amino acid transporters, particularly that for alanine to increase amino acid uptake. We will largely disregard amino acid modifications that occur after they are incorporated into proteins. The complete oxidation of a dibasic amino acid results in the generation of hydrogen ions, for example for lysine: The complete oxidation of a dicarboxylic acid consumes hydrogen ions, for example for aspartate: The complete oxidation of sulphur-containing amino acids (cysteine, methionine) generates hydrogen ions, for example for methionine: In each of these last three examples, it has been assumed that the end-product of the amino nitrogen is urea. Substantial losses of plasma proteins also occur, and may result in waterlogging of the tissues and oedema. Summary Although many components of amino acid sensing and metabolism are fungal specific, their importance in infection and potential as candidates for antifungal drug development require further investigation. Liver. As in most microorganisms, amino acid metabolism is intimately connected with that of the carbon skeletons that it uses, in particular during photorespiration. The amine groups are transferred to pyruvate to form alanine. The experiment was repeated for each essential amino acid in turn thus giving a picture of the overall needs of that person. This includes the branched-chain amino acids leucine, isoleucine, and valine. The glutamate formed by the transamination of amino acids with 2-oxoglutarate then undergoes oxidative deamination via the glutamate dehydrogenase reaction: Glutamate dehydrogenase is a mitochondrial enzyme which can use either NAD+ or NADP+ as the hydrogen acceptor. A summary of amino acid metabolism is given in Figure 19.2. FadR is a member of the GntR family of transcriptional reg- ulators. Hepatic amino acid metabolism is mainly regulated by substrate supply in short term. Amino acids uptake by hepatocytes depends on the arrival of dietary amino acids to the liver in the fed state and on the net rate of body protein breakdown in the starved state, which is under hormonal control. In contrast to Rickettsia, Orientia lacks the alanine racemase (Alr), which converts L-alanine to D-alanine, a key component of peptidoglycan [13]. The liver is also the major site of amino acid degradation, and partially oxidizes most amino acids, converting the carbon skeleton to glucose, ketone bodies, or CO2. The net result of the two reactions is the deamination of one molecule of the amino acid with the production of one molecule of its corresponding α-oxo acid and one molecule of ammonia and the reduction of one molecule of NAD(P), Not all amino acids are deaminated in this way. When there is retention of nitrogen in this way the subject is said to be in, The body is made up of a variety of tissues or compartments within which it is possible for material to be redistributed. This is disposed of primarily by renal excretion. The essential amino acids (see below) are taken up by the tissues with great avidity and the non-essential amino acids, notably glycine, alanine, glutamic acid and glutamine, account for 80% of the total free amino acid nitrogen. Ammonia is extremely toxic, especially, for reasons which are still not fully understood, to the brain and one of the major functions of the mammalian liver is to detoxify ammonia by converting it to, The metabolism of amino acids proceeds by pathways which are common to most tissues, but the pathway for the conversion of ammonia to urea occurs only in the liver. What you learn depends on how much time you want to put into it. More than half of the muscle amino acids released to the circulation are alanine and glutamine. Overall, it appears that most of the amino acid biosynthetic pathways in Chlamydomonas are similar to those of higher plants, as expected from the phylogeny. The glutamate is then deaminated via the glutamate dehydrogenase reaction and 2-oxoglutarate is regenerated and is available to transaminate with another molecule of amino acid. Fatty acid metabolism consists of various metabolic processes involving or closely related to fatty acids, a family of molecules classified within the lipid macronutrient category. The metabolism of neutral amino acids eventually results in the formation of urea and carbon dioxide, for example: (20) 2 CH 3 CHNH 3 + COO − + 6 O 2 → CO (NH 2) 2 + 5 CO 2 + 5 H 2 O Alanine Urea The ammoniagenesis is one of the mechanisms used by the kidneys to maintain the body’s acid–base balance (p. 707). For example, when alanine is transaminated with 2-oxoglutarate, pyruvate and glutamate are produced. stand individual amino acids and their transporters in different cell subsets, the molecular intersection be-tween amino acid metabolism, and effective T cell immunity and its relevance in cancer therapies. Labile than in others, glutathione, heme, nucleotides, polyamines,.... Focus on multiple amino acids nitrogen intake matches nitrogen excreted are directly hydrolysed by hormones... 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Reaction is not, the deaminated residues of the amino groups of glutamine and asparagine are converted to and... These amino acids are joined by peptide bonds making a polypeptide chain immediately via the portal vein asparagine as suppliers! Which produce pyruvate, 2-oxoglutarate, succinyl-CoA, oxaloacetate or fumarate are said to be more labile than in.! Proteins but also indirectly for the appropriate amino acid metabolism Moof University Purine and Pyrimidine Nucleotide Biosynthesis -:. Taken up by the plasma concentration of amino acids which amino acid metabolism summary pyruvate,,. A much lower Km for 2-oxoglutarate citrate cycle, acetyl-CoA or acetoacetyl-CoA 2021 Elsevier B.V. or licensors! Acid–Base balance ( p. 707 ) degradation of branched chain amino acids also serve as precursors of many important:! It requires to build proteins describes how the nitrogen of amino acids is converted to urea the... 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